Hi Ben,
Great question. The combined per pixel format is great because it let’s you take advantage of video workflows, with benefits like good compression and audio sync. The risk as you have discovered is that it can be sensitive to compression, and even more so to color space conversions. If you are exporting from Premiere at max quality and seeing shelves/ripples in Unity, it could likely be a color space conversion issue. We have not done a certified set of tests for Premiere encoding. We recommend professional workflows all use FFMPEG, as it provides greater control and is free.
We’ve just updated our documentation and added an asset encoding guide focused on the best practices that we’ve developed using FFMPEG. Check it out here: Image Sequence encoding
While it’s designed with Depthkit Studio (multi-sensor) in mind, everything also applies to Depthkit Cinema and Depthkit Core (single-perspective) captures as well.
Let us know if that helps. If you do find a workflow for Premiere that preserves the color space and compression, also please share!